Friday, December 9, 2011

Notes On My 23andMe Raw Data


Runs of Homozygosity (ROHs)

At 200: 35 ROH 
At 195: 39 ROH 
At 190: 41 ROH 
At 180: 51 ROH 
At 170: 65 ROH 
At 160: 73 ROH 
At 150: 94 ROH 
At 140: 119 ROH 
At 130: 147 ROH 
At 120: 197 ROH 
At 110: 265 ROH 
At 100: 353 ROH 
At 90: 473 ROH 
At 80: 620 ROH 
At 70: 820 ROH 
At 60: 1127 ROH 
At 50: 1617 ROH 
At 40: 2356 ROH 
At 30: 3590 ROH 
At 20: 5963 ROH 
At 10: 12483 ROH 
At 2: 83753 ROH 
Total autosomal (Chr 1-22): 29.258 % (272188 of 930296 SNPs) are Heterozygous (this tally excludes 3 heterozygous SNPs that were treated as homozygous). 

Heterozygous Sequences
Heterozygous Sequences of length at least 20=3
Heterozygous Sequences of length at least 18=6
Heterozygous Sequences of length at least 17=14
Heterozygous Sequences of length at least 16=18
Heterozygous Sequences of length at least 15=29
Heterozygous Sequences of length at least 14=44
Heterozygous Sequences of length at least 13=81
Heterozygous Sequences of length at least 12=130
Heterozygous Sequences of length at least 11=221
Heterozygous Sequences of length at least 10=424
Heterozygous Sequences of length at least 09=706
Heterozygous Sequences of length at least 08=1242
Heterozygous Sequences of length at least 07=2291
Heterozygous Sequences of length at least 06=4208
Heterozygous Sequences of length at least 05=8222
Heterozygous Sequences of length at least 04=16061
Heterozygous Sequences of length at least 03=31605
Heterozygous Sequences of length at least 02=64378
29.259%(272191 of 930296 SNPs)are Heterozygous (this tally excludes NoCalls)


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